Tag: Glycobiology

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Where the Sugars and the Proteins Play: Q&A With Mia Huang

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A headshot of Dr. Huang.
Credit: Scripps Research Institute.

“I think there’s a very creative side to science, in figuring out how to approach a problem, which I find really engaging,” says Mia Huang, Ph.D., an associate professor of chemistry at the Scripps Research Institute in La Jolla, California. In an interview, Dr. Huang discussed her shift in interest from medicine to science, her graduate school work on nature-inspired antifreeze molecules, and her lab’s exploration of the roles of sugar-coated proteins in our bodies.

Get to Know Dr. Huang

  • Coffee or tea? Coffee
  • Favorite music genre? EDM
  • Cats or dogs? Dogs—I’m a proud mom to a 15-pound Bernedoodle
  • Rainy or sunny? Sunny
  • What was your childhood dream job? Scientist—I’m living the dream!
  • Favorite hobby? Playing video games
  • Favorite piece of lab safety equipment? Safety goggles
  • A scientist (past or present) you’d like to meet? Gilbert Ashwell and Anatol Morell (accidentally co-discovered the asialoglycoprotein receptor)

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Could a Spoonful of Sugar Be a Medicine?

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A spade-shaped group of cells glowing red, yellow, and green.
Glycans glow red, yellow, and green in this image of a zebrafish embryo’s jaw. Credit: Carolyn Bertozzi, University of California, Berkeley.

Large sugar molecules called glycans coat every cell in our bodies. They can also be found inside and between cells, and they are important for many biological processes, including how our cells interact with one another and with pathogens. For example, glycans on red blood cells determine blood type, and those on the cells of organs determine whether a person can receive a transplant from a particular donor. Scientists have only begun to explore sugars’ complexities and potential uses. Here, we look at the contributions three NIGMS-supported researchers are making to glycoscience.

Human Milk Sugars

Glycans called human milk oligosaccharides (HMOs) make up a significant portion of human milk. Study findings have shown that some HMOs can be prebiotics—substances that encourage beneficial bacteria to grow. Research has also revealed that some disease-causing microbes bind to certain HMOs, potentially allowing the germs to pass through the body without causing illness.

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PECASE Honoree Michael Boyce on Sugar’s Role in Cell Signaling and on Diversity, Equity, and Inclusion in the Scientific Workforce

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Headshot of Michael Boyce. Michael Boyce, associate professor of biochemistry at Duke University in Durham, North Carolina. Credit: Michael Boyce.

Sugars aren’t merely energy sources for our cells. They also play important signaling roles through a process called glycosylation, where they attach to proteins and lipids as tags. Although these sugar tags, called glycans, impact many cellular processes, they have long been understudied due to technical challenges. Now, advances in analytical tools like mass spectrometry are enabling scientists to examine the enormous complexity of glycans. Other advances also allow researchers to synthesize complex sugars, providing them with standards for analytical experiments.

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There’s an “Ome” for That

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In the 13 years since the sequencing of the human genome, the list of “omes” has proliferated. Drop us a comment with your favorite ome—we may feature it in a follow-up post next month.

Have you ever collected coins, cards, toy trains, stuffed animals? Did you feel the need to complete the set? If so, then you may be a completist. A completist will go to great lengths to acquire a complete set of something.

Scientists can also be completists who are inspired to identify and catalog every object in a particular field to further our understanding of it. For example, a comprehensive parts list of the human body—and of other organisms that are important in biomedical research—could aid in the development of novel treatments for diseases in the same way that a parts list for a car enables auto mechanics to build or repair a vehicle.

More than 15 years ago, scientists figured out how to catalog every gene in the human body. In the years since, rapid advances in technology and computational tools have allowed researchers to begin to categorize numerous aspects of the biological world. There’s actually a special way to name these collections: Add “ome” to the end of the class of objects being compiled. So, the complete set of genes in the body is called the “genome,” and the complete set of proteins is called the “proteome.”

Below are three -omes that NIH-funded scientists work with to understand human health.

Genome

Illustration of the entire outer shell of the bacteriophage MS2. Credit: Wikimedia Commons, Naranson.

The genome is the original -ome. In 1976, Belgium scientists identified all 3,569 DNA bases—the As, Cs, Gs and Ts that make up DNA’s code—in the genes of bacteriophage MS2, immortalizing this bacteria-infecting virus as possessing the first fully sequenced genome.

Over the next two decades, a small handful of additional genomes from other microorganisms followed. The first animal genome was completed in 1998. Just 5 years later, scientists identified all 3.2 billion DNA bases in the human genome, representing the work of more than 1,000 researchers from six countries over a period of 13 years. Continue reading “There’s an “Ome” for That”

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Sugar Rush in Research

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Cookies
Sugar sprinkled on cookies and other treats is often an attractive—and sweet tasting—finishing touch. But the sugar-rich coating that surrounds most cells is far more—it’s a vital ingredient for many basic cellular processes. Credit: Stock image.

Simple sugars such as sucrose (found in the sugar bowl) and fructose (in fruits and honey) provide the sweet finishing touches on many holiday treats. But did you know that versions of these molecules also serve important functions in our cells?

Cells assemble sugar molecules into chains known as glycans. These glycans, which can be linear or branching, play an astounding number of biological roles. When bound to proteins called lectins, they enable a fertilized egg to attach properly onto a woman’s uterine wall and help immune cells move out of a blood vessel to the site of an infection. When decorated with specific patterns of molecules called sulfates, glycans can help direct the growth of nerves. And it’s the glycans found on our blood cells that define blood type (A, B, AB or O). Continue reading “Sugar Rush in Research”

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The Sweet Side of Chemistry

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Glycans
Simple sugars connect in long, branched structures to create glycans. Credit: Stock image.

We’re in the middle of National Chemistry Week Exit icon, which this year focuses on “The Sweet Side of Chemistry—Candy.” Studying sugar chemistry is also relevant to our health.

The sugar in chocolate, taffy and other confections is a type of simple sugar called sucrose. In our bodies, sugars can exist in many forms, ranging from individual units like glucose to long, branched chains known as glycans containing thousands of individual sugar units linked together.

Glycans are involved in just about every aspect of how our cells work. They help make sure proteins are folded into the proper shape so they function correctly. They act as ZIP codes that direct newly made proteins to the right cellular locations. Some divert white blood cells to infection sites, and others serve as anchors for viruses to latch onto.

Because of the diverse and critical roles that glycans play in our bodies, chemists want to learn more about these molecules, with a long-term goal of harnessing them to treat or prevent disease. Read about some of their discoveries in the Why Sugars Might Surprise You article from Inside Life Science and the Life is Sweet article from Findings magazine. The You Are What You Eat chapter from ChemHealthWeb offers more details about the chemistry of sugar.

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Carbohydrates as Bacterial Camouflage: How Our Immune System Responds

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bacteria
Although invisible to our immune system’s antibodies, strains of a pneumonia-causing bacteria, Pseudomonas aeruginosa (orange), are easily detected by galectins. Credit: Centers for Disease Control and Prevention.

When harmful strains of bacteria invade our bodies, our immune system produces antibodies that identify the intruders by the specific carbohydrate structures coating them. Some strains, however, have coatings that mimic the carbohydrate structures found on our own cells, and this disguise allows them to evade detection by antibodies.

A team of scientists led by Richard Cummings of Emory University found that galectins, a class of proteins naturally produced by our bodies, can identify and kill these concealed bacteria without damaging our own mimicked cells. To make this discovery, the team used glass slides covered with more than 300 different carbohydrates extracted from the surface of bacterial cells. After testing the ability of galectins and antibodies to bind to specific carbohydrates on these slides, the researchers observed that the galectins easily detected the mammalian-like carbohydrates that the antibodies failed to recognize.

These findings provide a clearer understanding of the complementary roles played by galectins and antibodies in protecting us from a broad range of infections.

This work also was funded by NIH’s National Institute of Allergy and Infectious Diseases and National Heart, Lung, and Blood Institute.

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